Genotype

Struct Genotype 

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pub struct Genotype {
    pub alleles: Vec<Option<i32>>,
    pub phase: Vec<bool>,
}
Expand description

Represents a parsed genotype for a single sample.

The alleles array contains allele indices (0 = REF, 1+ = ALT), with null representing missing alleles (. in VCF notation).

The phase array indicates the phase separator between consecutive alleles:

  • false = unphased (/)
  • true = phased (|)

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§alleles: Vec<Option<i32>>

Allele indices. null represents a missing allele (.).

§phase: Vec<bool>

Phase separators. phase[i] indicates whether alleles[i+1] is phased with alleles[i] (true = |, false = /).

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impl From<Genotype> for Genotype

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fn from(g: Genotype) -> Self

Converts to this type from the input type.
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impl From<Genotype> for Genotype

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fn from(g: Genotype) -> Self

Converts to this type from the input type.
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impl FromNapiValue for Genotype

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unsafe fn from_napi_value( env: napi_env, napi_val: napi_value, ) -> Result<Genotype>

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fn from_unknown(value: Unknown<'_>) -> Result<Self, Error>

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impl ToNapiValue for Genotype

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unsafe fn to_napi_value(env: napi_env, val: Genotype) -> Result<napi_value>

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fn into_unknown(self, env: &Env) -> Result<Unknown<'_>, Error>

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impl TypeName for Genotype

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fn type_name() -> &'static str

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fn value_type() -> ValueType

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impl ValidateNapiValue for Genotype

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unsafe fn validate( env: *mut napi_env__, napi_val: *mut napi_value__, ) -> Result<*mut napi_value__, Error>

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impl<T> Any for T
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Gets the TypeId of self. Read more
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where T: ?Sized,

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fn borrow(&self) -> &T

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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> JsValuesTupleIntoVec for T
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fn into_vec(self, env: *mut napi_env__) -> Result<Vec<*mut napi_value__>, Error>

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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = Infallible

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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

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type Error = <U as TryFrom<T>>::Error

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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.
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impl<T> ErasedDestructor for T
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